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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915554.1_cds_XP_016465355.1_58316
CDS Infomation

[gene=LOC107788194] [db_xref=GeneID:107788194] [protein=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic-like] [protein_id=XP_016465355.1] [location=join(42060..42275,43751..43846,43952..44020,44195..44299,44382..44438,44534..44734,45970..46062,46151..46250,46531..46630,47735..47820,48112..48218)] [gbkey=CDS]
Sequence

ATGTCTACCTGTAATTTTCTTGGTAGTTACCAGCTTTACACTTGTTGTAATGTTAAAAAA
CCACACATTGGTTCCTTTAAAAAGAGTTCTTTTTCTCAATCTTGGTCAAAAAGGCCAAAT
GAGTCATCTTATTTTCACAAGAATTCTCAATTTGGAAGAAGCAATTTTGTTATAGTGAAG
GCTTCAGATTCAAGAACTACCAGAAAACAAGTAGAGATAACATATAATCCTGAAGAGAAG
TTTAATAAGTTAGCCGATGAAGTAGATAGAGAGGCTGGGCTTTCAAGACTTACTCTTTTT
TCACCTTGCAAGATAAATGTTTTCTTGAGAATAACGGGCAAGAGGGATGACGGCTATCAT
GATTTGGCATCTCTCTTTCATGTAATCAGTCTAGGAGATAAAATAAAATTCTCGCTGTCA
CCATCGAAATCAAAGGATCGTTTATCTACTAATGTTGCTGGAGTTCCACTCGACGAGAGA
AATTTGATTATAAAGGCCCTCAATCTTTATAGGAAAAAAACTGGAACAGACAATTACTTT
TGGATTCATCTTGATAAGAAGGTGCCTACTGGGGCTGGTCTTGGTGGTGGGAGCAGTAAT
GCTGCAACAGCTCTGTGGGCAGCAAACCAATTTAGCGGCTCTCTTGCCACTGAAAAGGAG
CTCCAAGAATGGTCTGGTGAGATCGGTTCTGATATTTCTTTCTTTTTCTCCCATGGAGCT
GCCTACTGTACGGGTAGGGGTGAGATTGTTCAAGATATCCCATCGCCCATACCATTTGAC
ATTCCAATGGTTCTAATAAAGCCTCAACAAGAATGCTCTACTGCTGAAGTTTACAAGCGT
TTTCAATTGGATCAGACTAGTAAGGTTGATCCCTTGAGCTTGCTGGAGAAGATCAAAACT
AGTGGAATATCTCAAGATGTGTGTGTCAATGATCTAGAACCTCCTGCTTTTGAAGTTCTT
CCATCTCTTAAAAGGTTAAAACAGCGAGTGATCGCTGCCGGCCGAGGACAGTATGATGCA
GTCTTCATGTCTGGAAGTGGAAGCACAATAGTAGGGGTTGGCTCTCCGGATCCTCCACAA
TTTGTTTACGACGATGAAGAATACAGGGATGTCTTCTTGTCAGAAGCTAGTTTCATCACT
CGGGCAGCCAATCAGTGGTATGAGGAACCAGTTTCAGCTAGCAATTATGGTGATCAAGCC
GCGTTCTCCGGATCTTTTGATAATTCTTAG

Peptide Sequence

PEP ID

XP_016465355.1
PEP Infomation

PREDICTED: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic-like [Nicotiana tabacum]
Sequence

MSTCNFLGSYQLYTCCNVKKPHIGSFKKSSFSQSWSKRPNESSYFHKNSQFGRSNFVIVK
ASDSRTTRKQVEITYNPEEKFNKLADEVDREAGLSRLTLFSPCKINVFLRITGKRDDGYH
DLASLFHVISLGDKIKFSLSPSKSKDRLSTNVAGVPLDERNLIIKALNLYRKKTGTDNYF
WIHLDKKVPTGAGLGGGSSNAATALWAANQFSGSLATEKELQEWSGEIGSDISFFFSHGA
AYCTGRGEIVQDIPSPIPFDIPMVLIKPQQECSTAEVYKRFQLDQTSKVDPLSLLEKIKT
SGISQDVCVNDLEPPAFEVLPSLKRLKQRVIAAGRGQYDAVFMSGSGSTIVGVGSPDPPQ
FVYDDEEYRDVFLSEASFITRAANQWYEEPVSASNYGDQAAFSGSFDNS

Transcript Sequence

Gene sequence data has not been registered.